Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.48■□□□□ 0.07
KPNA4O00629 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KPNA4O00629 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KPNA4O00629 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
KPNA4O00629 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.47■□□□□ 0.07
KPNA4O00629 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KPNA4O00629 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.47■□□□□ 0.07
KPNA4O00629 AC064862.7-201ENST00000604520 867 ntBASIC15.47■□□□□ 0.07
KPNA4O00629 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 AC022532.1-201ENST00000624563 1728 ntBASIC15.47■□□□□ 0.07
KPNA4O00629 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KPNA4O00629 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
KPNA4O00629 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KPNA4O00629 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
KPNA4O00629 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.46■□□□□ 0.07
KPNA4O00629 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 AP002490.2-201ENST00000524791 560 ntBASIC15.46■□□□□ 0.07
KPNA4O00629 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.46■□□□□ 0.07
KPNA4O00629 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.46■□□□□ 0.07
KPNA4O00629 MIR3652-201ENST00000579335 131 ntBASIC15.46■□□□□ 0.07
KPNA4O00629 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.46■□□□□ 0.07
KPNA4O00629 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.46■□□□□ 0.07
KPNA4O00629 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KPNA4O00629 AC243591.1-201ENST00000452967 1364 ntBASIC15.46■□□□□ 0.07
KPNA4O00629 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.46■□□□□ 0.06
KPNA4O00629 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.46■□□□□ 0.06
KPNA4O00629 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KPNA4O00629 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KPNA4O00629 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms