Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MIR33B-201ENST00000385104 96 ntBASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 AL442647.2-201ENST00000429864 857 ntBASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 KRT18P55-202ENST00000578578 1546 ntBASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.32■□□□□ 0.04
C1QTNF9BB2RNN3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC008764.6-201ENST00000595909 2069 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 RPL17P11-201ENST00000417593 544 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SCARNA20.5-201ENST00000516991 142 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC026979.3-201ENST00000607315 403 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC244669.2-201ENST00000612320 853 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AL008638.5-201ENST00000623814 1298 ntBASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1QTNF9BB2RNN3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1QTNF9BB2RNN3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms