Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RCCD1A6NED2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCCD1A6NED2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AC006557.2-201ENST00000592985 1240 ntBASIC17.48■□□□□ 0.39
RCCD1A6NED2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
RCCD1A6NED2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCCD1A6NED2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 RPS2P1-201ENST00000434010 821 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 SCARNA2-201ENST00000458748 420 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 MIR3652-201ENST00000579335 131 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms