Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 KLF2P3-201ENST00000451977 1087 ntBASIC18.91■□□□□ 0.62
PALM3A6NDB9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 DUX4L27-201ENST00000554796 1261 ntBASIC18.91■□□□□ 0.62
PALM3A6NDB9 MIR4321-201ENST00000592276 80 ntBASIC18.91■□□□□ 0.62
PALM3A6NDB9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 AL365330.1-201ENST00000607459 531 ntBASIC18.91■□□□□ 0.62
PALM3A6NDB9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 AC003101.2-201ENST00000612557 442 ntBASIC18.91■□□□□ 0.62
PALM3A6NDB9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.91■□□□□ 0.62
PALM3A6NDB9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PALM3A6NDB9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AC093512.1-201ENST00000617969 520 ntBASIC18.9■□□□□ 0.62
PALM3A6NDB9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.9■□□□□ 0.62
PALM3A6NDB9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PALM3A6NDB9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
PALM3A6NDB9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.89■□□□□ 0.62
PALM3A6NDB9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PALM3A6NDB9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms