Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 CLUHP6-201ENST00000580789 941 ntBASIC18.82■□□□□ 0.6
SSC5DA1L4H1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 LETM1P2-201ENST00000597330 2178 ntBASIC18.82■□□□□ 0.6
SSC5DA1L4H1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSC5DA1L4H1 AC007613.1-201ENST00000572811 2597 ntBASIC18.82■□□□□ 0.6
SSC5DA1L4H1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 BRWD1P1-201ENST00000401091 371 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 FAM21FP-201ENST00000426241 1131 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC007551.1-201ENST00000457394 519 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 KRT90P-201ENST00000549264 1064 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC120045.2-201ENST00000567334 178 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AL049840.4-201ENST00000602422 811 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 LINC01144-201ENST00000626198 1710 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC004987.2-201ENST00000395959 1148 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 HAUS4P1-201ENST00000406739 1145 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AC005252.2-201ENST00000624630 1141 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 AL139099.5-201ENST00000635274 300 ntBASIC18.81■□□□□ 0.6
SSC5DA1L4H1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.8■□□□□ 0.6
SSC5DA1L4H1 MIR1247-201ENST00000408206 136 ntBASIC18.8■□□□□ 0.6
SSC5DA1L4H1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms