Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 AP3S2-216ENST00000617003 1561 ntBASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 AL603832.2-201ENST00000566195 2125 ntBASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-4A0A0C4DH59 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MIR1233-2-201ENST00000408138 82 ntBASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 MIR1233-1-201ENST00000408722 82 ntBASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 KRT18P32-201ENST00000424695 1287 ntBASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV5-4A0A0C4DH59 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 CNN2P11-201ENST00000429351 262 ntBASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 AC023141.5-201ENST00000458585 616 ntBASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 RARRES2P9-201ENST00000565168 469 ntBASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 AC027612.4-201ENST00000605371 583 ntBASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV5-4A0A0C4DH59 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms