Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COX11Q9Y6N1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COX11Q9Y6N1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.15■□□□□ 0.34
COX11Q9Y6N1 AC135983.2-203ENST00000454486 1613 ntBASIC17.14■□□□□ 0.33
COX11Q9Y6N1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COX11Q9Y6N1 DUSP8P5-201ENST00000422884 1815 ntBASIC17.14■□□□□ 0.33
COX11Q9Y6N1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 MIR7108-201ENST00000614319 87 ntBASIC17.13■□□□□ 0.33
COX11Q9Y6N1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COX11Q9Y6N1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 DUX4L11-201ENST00000611504 1267 ntBASIC17.12■□□□□ 0.33
COX11Q9Y6N1 DUX4L12-201ENST00000614593 1267 ntBASIC17.12■□□□□ 0.33
COX11Q9Y6N1 DUX4L14-201ENST00000621227 1267 ntBASIC17.12■□□□□ 0.33
COX11Q9Y6N1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COX11Q9Y6N1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.12■□□□□ 0.33
COX11Q9Y6N1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COX11Q9Y6N1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COX11Q9Y6N1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L13-201ENST00000554103 1267 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L15-201ENST00000611059 1267 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L23-201ENST00000615195 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L24-201ENST00000617576 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L22-201ENST00000618238 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L20-201ENST00000619712 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L21-201ENST00000622058 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L10-201ENST00000622460 1267 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 DUX4L25-201ENST00000624915 1269 ntBASIC17.09■□□□□ 0.33
COX11Q9Y6N1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COX11Q9Y6N1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COX11Q9Y6N1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
COX11Q9Y6N1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COX11Q9Y6N1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.08■□□□□ 0.32
COX11Q9Y6N1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COX11Q9Y6N1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms