Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
NR2E3Q9Y5X4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.65■■□□□ 1.86
NR2E3Q9Y5X4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
NR2E3Q9Y5X4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NR2E3Q9Y5X4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.86
NR2E3Q9Y5X4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.64■■□□□ 1.86
NR2E3Q9Y5X4 UNC93B3-201ENST00000308076 687 ntBASIC26.64■■□□□ 1.86
NR2E3Q9Y5X4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.64■■□□□ 1.86
NR2E3Q9Y5X4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 AL136162.1-201ENST00000607711 1078 ntBASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.63■■□□□ 1.85
NR2E3Q9Y5X4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 EDA-201ENST00000338901 1233 ntBASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
NR2E3Q9Y5X4 AL355001.2-201ENST00000620617 1191 ntBASIC26.61■■□□□ 1.85
NR2E3Q9Y5X4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.61■■□□□ 1.85
NR2E3Q9Y5X4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NR2E3Q9Y5X4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
NR2E3Q9Y5X4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
NR2E3Q9Y5X4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NR2E3Q9Y5X4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 AC105265.2-201ENST00000467189 838 ntBASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 AP002414.2-202ENST00000590929 1450 ntBASIC26.59■■□□□ 1.85
NR2E3Q9Y5X4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NR2E3Q9Y5X4 AC097381.1-201ENST00000429019 1296 ntBASIC26.58■■□□□ 1.85
NR2E3Q9Y5X4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NR2E3Q9Y5X4 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.58■■□□□ 1.85
NR2E3Q9Y5X4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.58■■□□□ 1.84
NR2E3Q9Y5X4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 AL162430.1-201ENST00000480705 870 ntBASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.57■■□□□ 1.84
NR2E3Q9Y5X4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.56■■□□□ 1.84
NR2E3Q9Y5X4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.56■■□□□ 1.84
NR2E3Q9Y5X4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.56■■□□□ 1.84
NR2E3Q9Y5X4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NR2E3Q9Y5X4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
NR2E3Q9Y5X4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
NR2E3Q9Y5X4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.52■■□□□ 1.84
NR2E3Q9Y5X4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.51■■□□□ 1.83
NR2E3Q9Y5X4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms