Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA2Q9Y5H1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA2Q9Y5H1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
PCDHGA2Q9Y5H1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA2Q9Y5H1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDHGA2Q9Y5H1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA2Q9Y5H1 MTDHP2-201ENST00000601468 714 ntBASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 MIR4466-201ENST00000606121 54 ntBASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.45
PCDHGA2Q9Y5H1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA2Q9Y5H1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.13■■□□□ 1.45
PCDHGA2Q9Y5H1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA2Q9Y5H1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA2Q9Y5H1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGA2Q9Y5H1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA2Q9Y5H1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGA2Q9Y5H1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
PCDHGA2Q9Y5H1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 ZNRF2P3-201ENST00000424200 374 ntBASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 MIR4281-201ENST00000580852 62 ntBASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGA2Q9Y5H1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA2Q9Y5H1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHGA2Q9Y5H1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA2Q9Y5H1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGA2Q9Y5H1 AC104564.3-201ENST00000582367 638 ntBASIC24.08■■□□□ 1.45
PCDHGA2Q9Y5H1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.08■■□□□ 1.44
PCDHGA2Q9Y5H1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 LINC01003-201ENST00000564834 1764 ntBASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHGA2Q9Y5H1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 BX255925.1-201ENST00000566954 1854 ntBASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PCDHGA2Q9Y5H1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 AC026271.2-201ENST00000428091 497 ntBASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 AC142381.2-201ENST00000566120 298 ntBASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 AL512631.2-201ENST00000604634 923 ntBASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 AC106739.1-201ENST00000617035 715 ntBASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA2Q9Y5H1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA2Q9Y5H1 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGA2Q9Y5H1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PCDHGA2Q9Y5H1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 MIR5787-201ENST00000611784 55 ntBASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA2Q9Y5H1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA2Q9Y5H1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
PCDHGA2Q9Y5H1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA2Q9Y5H1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA2Q9Y5H1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.01■■□□□ 1.43
PCDHGA2Q9Y5H1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA2Q9Y5H1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 PBX2P1-201ENST00000493219 1291 ntBASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms