Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC37.19■■■■□ 3.54
CDK11AQ9UQ88 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC37.19■■■■□ 3.54
CDK11AQ9UQ88 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC37.19■■■■□ 3.54
CDK11AQ9UQ88 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
CDK11AQ9UQ88 AL139246.5-201ENST00000606645 996 ntBASIC37.18■■■■□ 3.54
CDK11AQ9UQ88 GAK-223ENST00000628912 497 ntTSL 5 BASIC37.18■■■■□ 3.54
CDK11AQ9UQ88 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC37.18■■■■□ 3.54
CDK11AQ9UQ88 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC37.18■■■■□ 3.54
CDK11AQ9UQ88 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 AL117332.1-201ENST00000622628 974 ntBASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CDK11AQ9UQ88 SNAI3-AS1-204ENST00000567997 2048 ntBASIC37.16■■■■□ 3.54
CDK11AQ9UQ88 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.16■■■■□ 3.54
CDK11AQ9UQ88 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC37.16■■■■□ 3.54
CDK11AQ9UQ88 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MIR3621-201ENST00000580529 85 ntBASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MIR6724-1-201ENST00000616420 92 ntBASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MIR6724-2-201ENST00000616483 92 ntBASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MIR6724-4-201ENST00000617390 92 ntBASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MIR6724-3-201ENST00000622482 92 ntBASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC37.15■■■■□ 3.54
CDK11AQ9UQ88 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC37.14■■■■□ 3.54
CDK11AQ9UQ88 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CDK11AQ9UQ88 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CDK11AQ9UQ88 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC37.13■■■■□ 3.54
CDK11AQ9UQ88 SHF-208ENST00000560734 1731 ntTSL 3 BASIC37.13■■■■□ 3.54
CDK11AQ9UQ88 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC37.13■■■■□ 3.53
CDK11AQ9UQ88 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC37.13■■■■□ 3.53
CDK11AQ9UQ88 SENP5-202ENST00000419026 973 ntTSL 3 BASIC37.13■■■■□ 3.53
CDK11AQ9UQ88 MTDHP2-201ENST00000601468 714 ntBASIC37.13■■■■□ 3.53
CDK11AQ9UQ88 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC37.13■■■■□ 3.53
CDK11AQ9UQ88 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC37.12■■■■□ 3.53
CDK11AQ9UQ88 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDK11AQ9UQ88 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
CDK11AQ9UQ88 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.12■■■■□ 3.53
CDK11AQ9UQ88 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDK11AQ9UQ88 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
CDK11AQ9UQ88 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CDK11AQ9UQ88 NALT1-201ENST00000429224 738 ntTSL 5 BASIC37.11■■■■□ 3.53
CDK11AQ9UQ88 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC37.11■■■■□ 3.53
CDK11AQ9UQ88 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC37.1■■■■□ 3.53
CDK11AQ9UQ88 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CDK11AQ9UQ88 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CDK11AQ9UQ88 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 AL136116.3-201ENST00000402907 1138 ntBASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
CDK11AQ9UQ88 LSM4-201ENST00000252816 986 ntTSL 2 BASIC37.08■■■■□ 3.53
CDK11AQ9UQ88 SSSCA1-AS1-201ENST00000567594 614 ntBASIC37.08■■■■□ 3.53
CDK11AQ9UQ88 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC37.08■■■■□ 3.53
CDK11AQ9UQ88 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.08■■■■□ 3.53
CDK11AQ9UQ88 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.07■■■■□ 3.53
CDK11AQ9UQ88 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC37.07■■■■□ 3.52
CDK11AQ9UQ88 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC37.07■■■■□ 3.52
CDK11AQ9UQ88 RALB-208ENST00000631312 311 ntTSL 5 BASIC37.07■■■■□ 3.52
CDK11AQ9UQ88 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
CDK11AQ9UQ88 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
CDK11AQ9UQ88 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 EXOG-217ENST00000630638 197 ntTSL 5 BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CDK11AQ9UQ88 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
CDK11AQ9UQ88 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC37.05■■■■□ 3.52
CDK11AQ9UQ88 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDK11AQ9UQ88 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC37.04■■■■□ 3.52
CDK11AQ9UQ88 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC37.04■■■■□ 3.52
CDK11AQ9UQ88 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC37.04■■■■□ 3.52
CDK11AQ9UQ88 AL356740.2-201ENST00000601559 647 ntBASIC37.04■■■■□ 3.52
CDK11AQ9UQ88 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC37.03■■■■□ 3.52
CDK11AQ9UQ88 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CDK11AQ9UQ88 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CDK11AQ9UQ88 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.03■■■■□ 3.52
CDK11AQ9UQ88 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC37.03■■■■□ 3.52
CDK11AQ9UQ88 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC37.02■■■■□ 3.52
CDK11AQ9UQ88 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC37.02■■■■□ 3.52
CDK11AQ9UQ88 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.01■■■■□ 3.52
CDK11AQ9UQ88 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
CDK11AQ9UQ88 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
CDK11AQ9UQ88 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CDK11AQ9UQ88 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC37■■■■□ 3.51
CDK11AQ9UQ88 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC37■■■■□ 3.51
CDK11AQ9UQ88 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC37■■■■□ 3.51
CDK11AQ9UQ88 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC37■■■■□ 3.51
CDK11AQ9UQ88 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC37■■■■□ 3.51
CDK11AQ9UQ88 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
CDK11AQ9UQ88 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC36.99■■■■□ 3.51
CDK11AQ9UQ88 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC36.99■■■■□ 3.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms