Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PPP4R1LQ9P1A2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP4R1LQ9P1A2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PPP4R1LQ9P1A2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 AC010980.1-201ENST00000587192 1142 ntBASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP4R1LQ9P1A2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R1LQ9P1A2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 LONRF2P2-201ENST00000439212 571 ntBASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R1LQ9P1A2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R1LQ9P1A2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R1LQ9P1A2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 AC019171.1-201ENST00000601251 1056 ntBASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PPP4R1LQ9P1A2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPP4R1LQ9P1A2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R1LQ9P1A2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R1LQ9P1A2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 PVT1_1.1-201ENST00000615125 194 ntBASIC21.62■■□□□ 1.05
PPP4R1LQ9P1A2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PPP4R1LQ9P1A2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R1LQ9P1A2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R1LQ9P1A2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R1LQ9P1A2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R1LQ9P1A2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R1LQ9P1A2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms