Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CDC42SE1Q9NRR8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDC42SE1Q9NRR8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CDC42SE1Q9NRR8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 AL135925.1-201ENST00000605920 1701 ntBASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.35□□□□□ -0.43
CDC42SE1Q9NRR8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 AC007375.3-201ENST00000600936 2314 ntBASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 AC097639.1-201ENST00000565519 1891 ntBASIC12.34□□□□□ -0.43
CDC42SE1Q9NRR8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 EP400NL-214ENST00000641289 2402 ntBASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CDC42SE1Q9NRR8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.32□□□□□ -0.44
CDC42SE1Q9NRR8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC42SE1Q9NRR8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms