Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42SE2Q9NRR3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC42SE2Q9NRR3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC42SE2Q9NRR3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 AC141586.4-201ENST00000624558 1573 ntBASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42SE2Q9NRR3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 MIR3648-2-201ENST00000581792 180 ntBASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 MIR3648-1-201ENST00000615959 180 ntBASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CDC42SE2Q9NRR3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42SE2Q9NRR3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDC42SE2Q9NRR3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42SE2Q9NRR3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC42SE2Q9NRR3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42SE2Q9NRR3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42SE2Q9NRR3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42SE2Q9NRR3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 AC025884.2-201ENST00000553429 711 ntBASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 MIR3960-201ENST00000583311 91 ntBASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDC42SE2Q9NRR3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 ABHD17AP4-201ENST00000411545 909 ntBASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42SE2Q9NRR3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms