Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.32■■□□□ 1.8
POLR3FQ9H1D9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.31■■□□□ 1.8
POLR3FQ9H1D9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
POLR3FQ9H1D9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
POLR3FQ9H1D9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
POLR3FQ9H1D9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
POLR3FQ9H1D9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
POLR3FQ9H1D9 AC145676.1-201ENST00000514988 2004 ntBASIC26.3■■□□□ 1.8
POLR3FQ9H1D9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 AC097639.1-201ENST00000565519 1891 ntBASIC26.29■■□□□ 1.8
POLR3FQ9H1D9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
POLR3FQ9H1D9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
POLR3FQ9H1D9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.28■■□□□ 1.8
POLR3FQ9H1D9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
POLR3FQ9H1D9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
POLR3FQ9H1D9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.27■■□□□ 1.8
POLR3FQ9H1D9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
POLR3FQ9H1D9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.27■■□□□ 1.8
POLR3FQ9H1D9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
POLR3FQ9H1D9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
POLR3FQ9H1D9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 AC103724.3-201ENST00000564481 992 ntBASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3FQ9H1D9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.24■■□□□ 1.79
POLR3FQ9H1D9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
POLR3FQ9H1D9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.24■■□□□ 1.79
POLR3FQ9H1D9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.24■■□□□ 1.79
POLR3FQ9H1D9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
POLR3FQ9H1D9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 AL451085.2-201ENST00000605085 799 ntBASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
POLR3FQ9H1D9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
POLR3FQ9H1D9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 AC022616.5-201ENST00000518796 181 ntBASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
POLR3FQ9H1D9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
POLR3FQ9H1D9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
POLR3FQ9H1D9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
POLR3FQ9H1D9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
POLR3FQ9H1D9 AL592295.1-201ENST00000400984 884 ntBASIC26.2■■□□□ 1.78
POLR3FQ9H1D9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
POLR3FQ9H1D9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
POLR3FQ9H1D9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 AL031848.2-201ENST00000607670 837 ntBASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.19■■□□□ 1.78
POLR3FQ9H1D9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3FQ9H1D9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
POLR3FQ9H1D9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3FQ9H1D9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3FQ9H1D9 FOXO3B-201ENST00000395675 1928 ntBASIC26.17■■□□□ 1.78
POLR3FQ9H1D9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3FQ9H1D9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
POLR3FQ9H1D9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.15■■□□□ 1.78
POLR3FQ9H1D9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms