Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRDL1Q9BU40 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 MIR3960-201ENST00000583311 91 ntBASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRDL1Q9BU40 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRDL1Q9BU40 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRDL1Q9BU40 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRDL1Q9BU40 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRDL1Q9BU40 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRDL1Q9BU40 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.64■□□□□ 0.57
CHRDL1Q9BU40 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRDL1Q9BU40 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDL1Q9BU40 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRDL1Q9BU40 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 RP9P-202ENST00000450133 1212 ntBASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDL1Q9BU40 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 AC093536.1-201ENST00000569153 554 ntBASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 AC007029.1-201ENST00000604183 313 ntBASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 AC142381.3-201ENST00000568208 1670 ntBASIC18.6■□□□□ 0.57
CHRDL1Q9BU40 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRDL1Q9BU40 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRDL1Q9BU40 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRDL1Q9BU40 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms