Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 DUX4L28-201ENST00000623687 678 ntBASIC17.79■□□□□ 0.44
AP1S3Q96PC3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S3Q96PC3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 MIR3665-201ENST00000578708 105 ntBASIC17.78■□□□□ 0.44
AP1S3Q96PC3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S3Q96PC3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S3Q96PC3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S3Q96PC3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S3Q96PC3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S3Q96PC3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP1S3Q96PC3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
AP1S3Q96PC3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP1S3Q96PC3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S3Q96PC3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S3Q96PC3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP1S3Q96PC3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 AC010501.1-201ENST00000606270 1962 ntBASIC17.73■□□□□ 0.43
AP1S3Q96PC3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP1S3Q96PC3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S3Q96PC3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.72■□□□□ 0.43
AP1S3Q96PC3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S3Q96PC3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.42
AP1S3Q96PC3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP1S3Q96PC3 CLDN5-201ENST00000403084 2357 ntBASIC17.71■□□□□ 0.42
AP1S3Q96PC3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S3Q96PC3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms