Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R1Q8TF05 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R1Q8TF05 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R1Q8TF05 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R1Q8TF05 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
PPP4R1Q8TF05 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R1Q8TF05 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4R1Q8TF05 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4R1Q8TF05 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4R1Q8TF05 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
PPP4R1Q8TF05 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.58■■□□□ 1.36
PPP4R1Q8TF05 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4R1Q8TF05 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4R1Q8TF05 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.58■■□□□ 1.36
PPP4R1Q8TF05 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 AC022413.1-201ENST00000624602 984 ntBASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R1Q8TF05 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R1Q8TF05 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R1Q8TF05 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.56■■□□□ 1.36
PPP4R1Q8TF05 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R1Q8TF05 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R1Q8TF05 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1Q8TF05 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 AP003733.4-201ENST00000623785 1697 ntBASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1Q8TF05 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 LINC01124-201ENST00000409786 2117 ntBASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP4R1Q8TF05 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.52■■□□□ 1.36
PPP4R1Q8TF05 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1Q8TF05 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4R1Q8TF05 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.5■■□□□ 1.35
PPP4R1Q8TF05 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PPP4R1Q8TF05 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4R1Q8TF05 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
PPP4R1Q8TF05 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4R1Q8TF05 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms