Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPEB3Q8NE35 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPEB3Q8NE35 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPEB3Q8NE35 AC004987.1-201ENST00000428627 508 ntBASIC20.72■□□□□ 0.91
CPEB3Q8NE35 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CPEB3Q8NE35 DUX4L18-201ENST00000553347 1267 ntBASIC20.72■□□□□ 0.91
CPEB3Q8NE35 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.72■□□□□ 0.91
CPEB3Q8NE35 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.72■□□□□ 0.91
CPEB3Q8NE35 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 RPS2P7-201ENST00000447334 885 ntBASIC20.71■□□□□ 0.91
CPEB3Q8NE35 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPEB3Q8NE35 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.7■□□□□ 0.9
CPEB3Q8NE35 ATP5G2P3-201ENST00000429083 425 ntBASIC20.7■□□□□ 0.9
CPEB3Q8NE35 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPEB3Q8NE35 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPEB3Q8NE35 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.7■□□□□ 0.9
CPEB3Q8NE35 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 AC012354.3-201ENST00000623734 483 ntBASIC20.69■□□□□ 0.9
CPEB3Q8NE35 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.69■□□□□ 0.9
CPEB3Q8NE35 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 AC087393.1-201ENST00000582896 145 ntBASIC20.68■□□□□ 0.9
CPEB3Q8NE35 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPEB3Q8NE35 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 SLC6A10P-202ENST00000431994 2058 ntBASIC20.67■□□□□ 0.9
CPEB3Q8NE35 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPEB3Q8NE35 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 TSPY13P-201ENST00000338964 914 ntBASIC20.66■□□□□ 0.9
CPEB3Q8NE35 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.66■□□□□ 0.9
CPEB3Q8NE35 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.65■□□□□ 0.9
CPEB3Q8NE35 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CPEB3Q8NE35 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CPEB3Q8NE35 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPEB3Q8NE35 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 AL033527.3-201ENST00000566366 1196 ntBASIC20.64■□□□□ 0.89
CPEB3Q8NE35 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPEB3Q8NE35 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPEB3Q8NE35 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 AC022211.4-201ENST00000625094 2161 ntBASIC20.62■□□□□ 0.89
CPEB3Q8NE35 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPEB3Q8NE35 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms