Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
C3orf56Q8N813 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C3orf56Q8N813 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
C3orf56Q8N813 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C3orf56Q8N813 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.64■□□□□ 0.57
C3orf56Q8N813 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C3orf56Q8N813 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C3orf56Q8N813 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
C3orf56Q8N813 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C3orf56Q8N813 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C3orf56Q8N813 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C3orf56Q8N813 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C3orf56Q8N813 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C3orf56Q8N813 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.63■□□□□ 0.57
C3orf56Q8N813 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C3orf56Q8N813 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C3orf56Q8N813 UNC93B3-201ENST00000308076 687 ntBASIC18.62■□□□□ 0.57
C3orf56Q8N813 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C3orf56Q8N813 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 AL136162.1-201ENST00000607711 1078 ntBASIC18.62■□□□□ 0.57
C3orf56Q8N813 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.62■□□□□ 0.57
C3orf56Q8N813 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.62■□□□□ 0.57
C3orf56Q8N813 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C3orf56Q8N813 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C3orf56Q8N813 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C3orf56Q8N813 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C3orf56Q8N813 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C3orf56Q8N813 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C3orf56Q8N813 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.61■□□□□ 0.57
C3orf56Q8N813 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C3orf56Q8N813 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.6■□□□□ 0.57
C3orf56Q8N813 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C3orf56Q8N813 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.6■□□□□ 0.57
C3orf56Q8N813 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.6■□□□□ 0.57
C3orf56Q8N813 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.6■□□□□ 0.57
C3orf56Q8N813 AC011551.1-201ENST00000614101 683 ntBASIC18.6■□□□□ 0.57
C3orf56Q8N813 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.6■□□□□ 0.57
C3orf56Q8N813 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C3orf56Q8N813 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
C3orf56Q8N813 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C3orf56Q8N813 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C3orf56Q8N813 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.59■□□□□ 0.57
C3orf56Q8N813 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C3orf56Q8N813 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C3orf56Q8N813 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C3orf56Q8N813 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
C3orf56Q8N813 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.58■□□□□ 0.57
C3orf56Q8N813 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.58■□□□□ 0.56
C3orf56Q8N813 SUDS3P1-201ENST00000505831 966 ntBASIC18.58■□□□□ 0.56
C3orf56Q8N813 AL355001.2-201ENST00000620617 1191 ntBASIC18.58■□□□□ 0.56
C3orf56Q8N813 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.58■□□□□ 0.56
C3orf56Q8N813 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
C3orf56Q8N813 EDA-201ENST00000338901 1233 ntBASIC18.57■□□□□ 0.56
C3orf56Q8N813 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
C3orf56Q8N813 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
C3orf56Q8N813 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
C3orf56Q8N813 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.57■□□□□ 0.56
C3orf56Q8N813 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C3orf56Q8N813 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C3orf56Q8N813 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
C3orf56Q8N813 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C3orf56Q8N813 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
C3orf56Q8N813 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
C3orf56Q8N813 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.56■□□□□ 0.56
C3orf56Q8N813 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.56■□□□□ 0.56
C3orf56Q8N813 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C3orf56Q8N813 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C3orf56Q8N813 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.55■□□□□ 0.56
C3orf56Q8N813 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.55■□□□□ 0.56
C3orf56Q8N813 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C3orf56Q8N813 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C3orf56Q8N813 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C3orf56Q8N813 AC105265.2-201ENST00000467189 838 ntBASIC18.54■□□□□ 0.56
C3orf56Q8N813 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C3orf56Q8N813 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C3orf56Q8N813 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C3orf56Q8N813 SRD5A1P1-201ENST00000442297 786 ntBASIC18.53■□□□□ 0.56
C3orf56Q8N813 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C3orf56Q8N813 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C3orf56Q8N813 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms