Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TTC9BQ8N6N2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TTC9BQ8N6N2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TTC9BQ8N6N2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 AC096887.2-201ENST00000623443 1957 ntBASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 KRT18P24-201ENST00000344739 1156 ntBASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC9BQ8N6N2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 THA1P-201ENST00000590384 1145 ntBASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC9BQ8N6N2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TTC9BQ8N6N2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TTC9BQ8N6N2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
TTC9BQ8N6N2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC9BQ8N6N2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TTC9BQ8N6N2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.09■■□□□ 1.61
TTC9BQ8N6N2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.09■■□□□ 1.61
TTC9BQ8N6N2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 AL592295.1-201ENST00000400984 884 ntBASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 Z92544.1-202ENST00000571933 1220 ntBASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TTC9BQ8N6N2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TTC9BQ8N6N2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC9BQ8N6N2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 AL356441.2-201ENST00000443009 864 ntBASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC9BQ8N6N2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 AC131212.1-201ENST00000613771 668 ntBASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.05■■□□□ 1.6
TTC9BQ8N6N2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC9BQ8N6N2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.04■■□□□ 1.6
TTC9BQ8N6N2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC9BQ8N6N2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC9BQ8N6N2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
TTC9BQ8N6N2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 BX664725.1-201ENST00000438252 379 ntBASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 MIR4281-201ENST00000580852 62 ntBASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 MIR4787-201ENST00000607364 84 ntBASIC25.03■■□□□ 1.6
TTC9BQ8N6N2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.02■■□□□ 1.6
TTC9BQ8N6N2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC9BQ8N6N2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC9BQ8N6N2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TTC9BQ8N6N2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 KRT125P-201ENST00000546827 989 ntBASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC9BQ8N6N2 AC137630.3-201ENST00000607245 391 ntBASIC25■■□□□ 1.59
TTC9BQ8N6N2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TTC9BQ8N6N2 AC010501.1-201ENST00000606270 1962 ntBASIC25■■□□□ 1.59
TTC9BQ8N6N2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC9BQ8N6N2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.99■■□□□ 1.59
TTC9BQ8N6N2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC9BQ8N6N2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC9BQ8N6N2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 419.7 ms