Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SCUBE1Q8IWY4 GPX1-201ENST00000419349 1106 ntBASIC23.33■■□□□ 1.33
SCUBE1Q8IWY4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.33■■□□□ 1.33
SCUBE1Q8IWY4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.33■■□□□ 1.33
SCUBE1Q8IWY4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SCUBE1Q8IWY4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.33■■□□□ 1.32
SCUBE1Q8IWY4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.33■■□□□ 1.32
SCUBE1Q8IWY4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCUBE1Q8IWY4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCUBE1Q8IWY4 AC068473.5-201ENST00000616428 2072 ntBASIC23.31■■□□□ 1.32
SCUBE1Q8IWY4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCUBE1Q8IWY4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.31■■□□□ 1.32
SCUBE1Q8IWY4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCUBE1Q8IWY4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SCUBE1Q8IWY4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCUBE1Q8IWY4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
SCUBE1Q8IWY4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
SCUBE1Q8IWY4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 AC092296.2-201ENST00000589470 999 ntBASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCUBE1Q8IWY4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 AL157400.5-201ENST00000507624 621 ntBASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCUBE1Q8IWY4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCUBE1Q8IWY4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCUBE1Q8IWY4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCUBE1Q8IWY4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCUBE1Q8IWY4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SCUBE1Q8IWY4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCUBE1Q8IWY4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.24■■□□□ 1.31
SCUBE1Q8IWY4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 RNF126P1-201ENST00000567452 1320 ntBASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 LINC01124-201ENST00000409786 2117 ntBASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCUBE1Q8IWY4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 AC079834.2-201ENST00000609776 1949 ntBASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SCUBE1Q8IWY4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
SCUBE1Q8IWY4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SCUBE1Q8IWY4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCUBE1Q8IWY4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms