Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 AC010501.1-201ENST00000606270 1962 ntBASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC60Q8IWA6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.59■■□□□ 1.85
CCDC60Q8IWA6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CCDC60Q8IWA6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC60Q8IWA6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
CCDC60Q8IWA6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CCDC60Q8IWA6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC60Q8IWA6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.58■■□□□ 1.85
CCDC60Q8IWA6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CCDC60Q8IWA6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
CCDC60Q8IWA6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC60Q8IWA6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC60Q8IWA6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC60Q8IWA6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
CCDC60Q8IWA6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 KRT18P24-201ENST00000344739 1156 ntBASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 AL592295.1-201ENST00000400984 884 ntBASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC60Q8IWA6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 AC120024.1-201ENST00000562672 995 ntBASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC60Q8IWA6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC60Q8IWA6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 THA1P-201ENST00000590384 1145 ntBASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC60Q8IWA6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC60Q8IWA6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC60Q8IWA6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC60Q8IWA6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC60Q8IWA6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 AC097639.1-201ENST00000565519 1891 ntBASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC60Q8IWA6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 GUSBP5-201ENST00000418136 578 ntBASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC60Q8IWA6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 FOXO3B-201ENST00000395675 1928 ntBASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC60Q8IWA6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 AC239859.2-201ENST00000444165 318 ntBASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC60Q8IWA6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC60Q8IWA6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms