Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CROCCP3Q8IVE0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CROCCP3Q8IVE0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CROCCP3Q8IVE0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CROCCP3Q8IVE0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CROCCP3Q8IVE0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CROCCP3Q8IVE0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 AC137767.1-201ENST00000602918 1920 ntBASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.42■■□□□ 1.02
CROCCP3Q8IVE0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CROCCP3Q8IVE0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.41■■□□□ 1.02
CROCCP3Q8IVE0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CROCCP3Q8IVE0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CROCCP3Q8IVE0 C9orf163-202ENST00000624034 2573 ntBASIC21.41■■□□□ 1.02
CROCCP3Q8IVE0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 EP400NL-214ENST00000641289 2402 ntBASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP3Q8IVE0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CROCCP3Q8IVE0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CROCCP3Q8IVE0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.39■■□□□ 1.02
CROCCP3Q8IVE0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP3Q8IVE0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP3Q8IVE0 AP003733.4-201ENST00000623785 1697 ntBASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 SETD8P1-201ENST00000623146 1180 ntBASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP3Q8IVE0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 AL391121.1-201ENST00000607967 1349 ntBASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CROCCP3Q8IVE0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP3Q8IVE0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP3Q8IVE0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CROCCP3Q8IVE0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CROCCP3Q8IVE0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.33■■□□□ 1.01
CROCCP3Q8IVE0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CROCCP3Q8IVE0 RARRES2P7-201ENST00000567349 469 ntBASIC21.33■■□□□ 1.01
CROCCP3Q8IVE0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.33■■□□□ 1
CROCCP3Q8IVE0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms