Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL55Q7Z7F7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL55Q7Z7F7 AC097639.1-201ENST00000565519 1891 ntBASIC15.16■□□□□ 0.02
MRPL55Q7Z7F7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL55Q7Z7F7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL55Q7Z7F7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 SMPD5-203ENST00000639008 1464 ntBASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 AC025884.2-201ENST00000553429 711 ntBASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRPL55Q7Z7F7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL55Q7Z7F7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL55Q7Z7F7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MRPL55Q7Z7F7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.14■□□□□ 0.01
MRPL55Q7Z7F7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.14■□□□□ 0.01
MRPL55Q7Z7F7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.13■□□□□ 0.01
MRPL55Q7Z7F7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 AC092296.2-201ENST00000589470 999 ntBASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 AC022413.1-201ENST00000624602 984 ntBASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MRPL55Q7Z7F7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 ECEL1P2-201ENST00000461596 1295 ntBASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MRPL55Q7Z7F7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 AC138932.3-201ENST00000567634 1902 ntBASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MRPL55Q7Z7F7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
MRPL55Q7Z7F7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MRPL55Q7Z7F7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MRPL55Q7Z7F7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
MRPL55Q7Z7F7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MRPL55Q7Z7F7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MRPL55Q7Z7F7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.08■□□□□ 0
MRPL55Q7Z7F7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MRPL55Q7Z7F7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.08■□□□□ 0
MRPL55Q7Z7F7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 RP9P-202ENST00000450133 1212 ntBASIC15.07■□□□□ 0
MRPL55Q7Z7F7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MRPL55Q7Z7F7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms