Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 MTDHP2-201ENST00000601468 714 ntBASIC20.42■□□□□ 0.86
CSMD2Q7Z408 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 AL449106.1-201ENST00000608517 1980 ntBASIC20.41■□□□□ 0.86
CSMD2Q7Z408 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.41■□□□□ 0.86
CSMD2Q7Z408 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD2Q7Z408 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD2Q7Z408 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.4■□□□□ 0.86
CSMD2Q7Z408 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD2Q7Z408 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD2Q7Z408 AC105265.2-201ENST00000467189 838 ntBASIC20.4■□□□□ 0.86
CSMD2Q7Z408 AL136967.2-201ENST00000623968 743 ntBASIC20.4■□□□□ 0.86
CSMD2Q7Z408 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CSMD2Q7Z408 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.39■□□□□ 0.86
CSMD2Q7Z408 AP002414.2-202ENST00000590929 1450 ntBASIC20.39■□□□□ 0.85
CSMD2Q7Z408 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD2Q7Z408 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD2Q7Z408 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD2Q7Z408 RARRES2P11-201ENST00000635158 484 ntBASIC20.39■□□□□ 0.85
CSMD2Q7Z408 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD2Q7Z408 MIR939-201ENST00000401314 82 ntBASIC20.39■□□□□ 0.85
CSMD2Q7Z408 AC024257.2-201ENST00000549699 147 ntBASIC20.39■□□□□ 0.85
CSMD2Q7Z408 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 AL356740.2-201ENST00000601559 647 ntBASIC20.38■□□□□ 0.85
CSMD2Q7Z408 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 UNC93B3-201ENST00000308076 687 ntBASIC20.38■□□□□ 0.85
CSMD2Q7Z408 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.38■□□□□ 0.85
CSMD2Q7Z408 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.38■□□□□ 0.85
CSMD2Q7Z408 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.37■□□□□ 0.85
CSMD2Q7Z408 BX255925.1-201ENST00000566954 1854 ntBASIC20.37■□□□□ 0.85
CSMD2Q7Z408 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CSMD2Q7Z408 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.37■□□□□ 0.85
CSMD2Q7Z408 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.36■□□□□ 0.85
CSMD2Q7Z408 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSMD2Q7Z408 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSMD2Q7Z408 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CSMD2Q7Z408 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSMD2Q7Z408 EDA-201ENST00000338901 1233 ntBASIC20.33■□□□□ 0.85
CSMD2Q7Z408 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 AF131216.4-201ENST00000638924 1588 ntBASIC20.33■□□□□ 0.85
CSMD2Q7Z408 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD2Q7Z408 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CSMD2Q7Z408 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSMD2Q7Z408 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSMD2Q7Z408 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.33■□□□□ 0.84
CSMD2Q7Z408 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.33■□□□□ 0.84
CSMD2Q7Z408 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.32■□□□□ 0.84
CSMD2Q7Z408 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSMD2Q7Z408 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CSMD2Q7Z408 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
CSMD2Q7Z408 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSMD2Q7Z408 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSMD2Q7Z408 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSMD2Q7Z408 AP001330.3-201ENST00000520123 633 ntBASIC20.31■□□□□ 0.84
CSMD2Q7Z408 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSMD2Q7Z408 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSMD2Q7Z408 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSMD2Q7Z408 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSMD2Q7Z408 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.3■□□□□ 0.84
CSMD2Q7Z408 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms