Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RGPD4Q7Z3J3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
RGPD4Q7Z3J3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RGPD4Q7Z3J3 UNC93B3-201ENST00000308076 687 ntBASIC30.94■■■□□ 2.54
RGPD4Q7Z3J3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.94■■■□□ 2.54
RGPD4Q7Z3J3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.94■■■□□ 2.54
RGPD4Q7Z3J3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.94■■■□□ 2.54
RGPD4Q7Z3J3 AL139393.2-201ENST00000608721 2025 ntBASIC30.94■■■□□ 2.54
RGPD4Q7Z3J3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.93■■■□□ 2.54
RGPD4Q7Z3J3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 AL162430.1-201ENST00000480705 870 ntBASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.92■■■□□ 2.54
RGPD4Q7Z3J3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.91■■■□□ 2.54
RGPD4Q7Z3J3 AP001330.3-201ENST00000520123 633 ntBASIC30.9■■■□□ 2.54
RGPD4Q7Z3J3 AC024257.2-201ENST00000549699 147 ntBASIC30.9■■■□□ 2.54
RGPD4Q7Z3J3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RGPD4Q7Z3J3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RGPD4Q7Z3J3 MIR939-201ENST00000401314 82 ntBASIC30.89■■■□□ 2.54
RGPD4Q7Z3J3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RGPD4Q7Z3J3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.89■■■□□ 2.54
RGPD4Q7Z3J3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
RGPD4Q7Z3J3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
RGPD4Q7Z3J3 AF131216.4-201ENST00000638924 1588 ntBASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RGPD4Q7Z3J3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 AF213884.3-201ENST00000563833 479 ntBASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 SNX5-217ENST00000606557 1087 ntBASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.87■■■□□ 2.53
RGPD4Q7Z3J3 AL355001.2-201ENST00000620617 1191 ntBASIC30.86■■■□□ 2.53
RGPD4Q7Z3J3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RGPD4Q7Z3J3 AC087623.3-201ENST00000607047 1098 ntBASIC30.85■■■□□ 2.53
RGPD4Q7Z3J3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RGPD4Q7Z3J3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RGPD4Q7Z3J3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
RGPD4Q7Z3J3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.82■■■□□ 2.52
RGPD4Q7Z3J3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RGPD4Q7Z3J3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.81■■■□□ 2.52
RGPD4Q7Z3J3 AC090192.1-201ENST00000517740 490 ntBASIC30.81■■■□□ 2.52
RGPD4Q7Z3J3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RGPD4Q7Z3J3 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.8■■■□□ 2.52
RGPD4Q7Z3J3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RGPD4Q7Z3J3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.79■■■□□ 2.52
RGPD4Q7Z3J3 AL136967.2-201ENST00000623968 743 ntBASIC30.79■■■□□ 2.52
RGPD4Q7Z3J3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.79■■■□□ 2.52
RGPD4Q7Z3J3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RGPD4Q7Z3J3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RGPD4Q7Z3J3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
RGPD4Q7Z3J3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.78■■■□□ 2.52
RGPD4Q7Z3J3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.77■■■□□ 2.52
RGPD4Q7Z3J3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RGPD4Q7Z3J3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
RGPD4Q7Z3J3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RGPD4Q7Z3J3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.75■■■□□ 2.51
RGPD4Q7Z3J3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
RGPD4Q7Z3J3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RGPD4Q7Z3J3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RGPD4Q7Z3J3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms