Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATPAF1Q5TC12 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATPAF1Q5TC12 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATPAF1Q5TC12 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 MIR3960-201ENST00000583311 91 ntBASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ATPAF1Q5TC12 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATPAF1Q5TC12 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATPAF1Q5TC12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATPAF1Q5TC12 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATPAF1Q5TC12 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATPAF1Q5TC12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATPAF1Q5TC12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATPAF1Q5TC12 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATPAF1Q5TC12 RARRES2P2-201ENST00000394842 485 ntBASIC20.39■□□□□ 0.85
ATPAF1Q5TC12 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATPAF1Q5TC12 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATPAF1Q5TC12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 AC007029.1-201ENST00000604183 313 ntBASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
ATPAF1Q5TC12 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.37■□□□□ 0.85
ATPAF1Q5TC12 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 RP9P-202ENST00000450133 1212 ntBASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ATPAF1Q5TC12 AC012676.1-201ENST00000574705 1949 ntBASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.35■□□□□ 0.85
ATPAF1Q5TC12 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
ATPAF1Q5TC12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms