Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YER186CYER186C 921 nt5.83□□□□□ -1.48
RUP1Q12242 ENT2YLR206W 1842 nt5.83□□□□□ -1.48
RUP1Q12242 ASH1YKL185W 1767 nt5.83□□□□□ -1.48
RUP1Q12242 QDR3YBR043C 2070 nt5.83□□□□□ -1.48
RUP1Q12242 YFR006WYFR006W 1608 nt5.82□□□□□ -1.48
RUP1Q12242 VCX1YDL128W 1236 nt5.82□□□□□ -1.48
RUP1Q12242 SIP2YGL208W 1248 nt5.82□□□□□ -1.48
RUP1Q12242 YGR139WYGR139W 339 nt5.82□□□□□ -1.48
RUP1Q12242 YPR114WYPR114W 948 nt5.82□□□□□ -1.48
RUP1Q12242 YRF1-4YLR466W 4149 nt5.82□□□□□ -1.48
RUP1Q12242 STE13YOR219C 2796 nt5.82□□□□□ -1.48
RUP1Q12242 YEL020CYEL020C 1683 nt5.82□□□□□ -1.48
RUP1Q12242 MCM3YEL032W 2916 nt5.81□□□□□ -1.48
RUP1Q12242 LDS1YAL018C 978 nt5.81□□□□□ -1.48
RUP1Q12242 QRI5YLR204W 336 nt5.81□□□□□ -1.48
RUP1Q12242 YLR317WYLR317W 435 nt5.81□□□□□ -1.48
RUP1Q12242 CAF40YNL288W 1122 nt5.81□□□□□ -1.48
RUP1Q12242 MRPS16YPL013C 366 nt5.81□□□□□ -1.48
RUP1Q12242 ICL1YER065C 1674 nt5.81□□□□□ -1.48
RUP1Q12242 NHA1YLR138W 2958 nt5.81□□□□□ -1.48
RUP1Q12242 ATG23YLR431C 1362 nt5.8□□□□□ -1.48
RUP1Q12242 CDC34YDR054C 888 nt5.8□□□□□ -1.48
RUP1Q12242 MDM31YHR194W 1740 nt5.79□□□□□ -1.48
RUP1Q12242 OPT1YJL212C 2400 nt5.79□□□□□ -1.48
RUP1Q12242 YIL077CYIL077C 963 nt5.79□□□□□ -1.48
RUP1Q12242 ASK1YKL052C 879 nt5.79□□□□□ -1.48
RUP1Q12242 SSK1YLR006C 2139 nt5.79□□□□□ -1.48
RUP1Q12242 YIR007WYIR007W 2295 nt5.79□□□□□ -1.48
RUP1Q12242 DIA3YDL024C 1407 nt5.79□□□□□ -1.48
RUP1Q12242 SSK22YCR073C 3996 nt5.79□□□□□ -1.48
RUP1Q12242 ATG4YNL223W 1485 nt5.78□□□□□ -1.48
RUP1Q12242 MID1YNL291C 1647 nt5.78□□□□□ -1.48
RUP1Q12242 SPG1YGR236C 288 nt5.78□□□□□ -1.48
RUP1Q12242 RFA1YAR007C 1866 nt5.78□□□□□ -1.48
RUP1Q12242 STM1YLR150W 822 nt5.78□□□□□ -1.48
RUP1Q12242 DBP9YLR276C 1785 nt5.78□□□□□ -1.48
RUP1Q12242 SCT1YBL011W 2280 nt5.77□□□□□ -1.49
RUP1Q12242 YDR034W-BYDR034W-B 156 nt5.77□□□□□ -1.49
RUP1Q12242 PRE3YJL001W 648 nt5.77□□□□□ -1.49
RUP1Q12242 ZRT2YLR130C 1269 nt5.77□□□□□ -1.49
RUP1Q12242 JNM1YMR294W 1122 nt5.77□□□□□ -1.49
RUP1Q12242 RHO2YNL090W 579 nt5.77□□□□□ -1.49
RUP1Q12242 PZF1YPR186C 1290 nt5.77□□□□□ -1.49
RUP1Q12242 SMF2YHR050W 1650 nt5.77□□□□□ -1.49
RUP1Q12242 LDB19YOR322C 2457 nt5.76□□□□□ -1.49
RUP1Q12242 CLP1YOR250C 1338 nt5.76□□□□□ -1.49
RUP1Q12242 HSF1YGL073W 2502 nt5.76□□□□□ -1.49
RUP1Q12242 PAP2YOL115W 1755 nt5.76□□□□□ -1.49
RUP1Q12242 KSS1YGR040W 1107 nt5.76□□□□□ -1.49
RUP1Q12242 DOT5YIL010W 648 nt5.76□□□□□ -1.49
RUP1Q12242 MOG1YJR074W 657 nt5.76□□□□□ -1.49
RUP1Q12242 RPS5YJR123W 678 nt5.76□□□□□ -1.49
RUP1Q12242 VTC2YFL004W 2487 nt5.76□□□□□ -1.49
RUP1Q12242 MSN2YMR037C 2115 nt5.75□□□□□ -1.49
RUP1Q12242 YHR145CYHR145C 357 nt5.75□□□□□ -1.49
RUP1Q12242 RHO4YKR055W 876 nt5.75□□□□□ -1.49
RUP1Q12242 SLD7YOR060C 774 nt5.75□□□□□ -1.49
RUP1Q12242 MNN2YBR015C 1794 nt5.75□□□□□ -1.49
RUP1Q12242 IME2YJL106W 1938 nt5.74□□□□□ -1.49
RUP1Q12242 BUD32YGR262C 786 nt5.74□□□□□ -1.49
RUP1Q12242 CDC11YJR076C 1248 nt5.74□□□□□ -1.49
RUP1Q12242 GCV3YAL044C 513 nt5.74□□□□□ -1.49
RUP1Q12242 YLR296WYLR296W 327 nt5.74□□□□□ -1.49
RUP1Q12242 AVO2YMR068W 1281 nt5.74□□□□□ -1.49
RUP1Q12242 CPA1YOR303W 1236 nt5.74□□□□□ -1.49
RUP1Q12242 RRT2YBR246W 1164 nt5.74□□□□□ -1.49
RUP1Q12242 GYP1YOR070C 1914 nt5.74□□□□□ -1.49
RUP1Q12242 YDL129WYDL129W 876 nt5.73□□□□□ -1.49
RUP1Q12242 YEL077CYEL077C 3834 nt5.73□□□□□ -1.49
RUP1Q12242 RGT1YKL038W 3513 nt5.73□□□□□ -1.49
RUP1Q12242 LYS21YDL131W 1323 nt5.73□□□□□ -1.49
RUP1Q12242 HXT17YNR072W 1695 nt5.72□□□□□ -1.49
RUP1Q12242 PKC1YBL105C 3456 nt5.72□□□□□ -1.49
RUP1Q12242 GIT1YCR098C 1557 nt5.72□□□□□ -1.49
RUP1Q12242 DRS1YLL008W 2259 nt5.72□□□□□ -1.49
RUP1Q12242 IES1YFL013C 2079 nt5.72□□□□□ -1.49
RUP1Q12242 SUP19tS(UGA)E 82 nt5.72□□□□□ -1.49
RUP1Q12242 SUP17tS(UGA)I 82 nt5.72□□□□□ -1.49
RUP1Q12242 SUP16tS(UGA)P 82 nt5.72□□□□□ -1.49
RUP1Q12242 YIR017W-AYIR017W-A 600 nt5.72□□□□□ -1.49
RUP1Q12242 YPR160C-AYPR160C-A 285 nt5.72□□□□□ -1.49
RUP1Q12242 UTP4YDR324C 2331 nt5.72□□□□□ -1.49
RUP1Q12242 SKS1YPL026C 1509 nt5.72□□□□□ -1.49
RUP1Q12242 GPB2YAL056W 2643 nt5.72□□□□□ -1.49
RUP1Q12242 NPA3YJR072C 1158 nt5.71□□□□□ -1.5
RUP1Q12242 HAP3YBL021C 435 nt5.71□□□□□ -1.5
RUP1Q12242 HOR7YMR251W-A 180 nt5.71□□□□□ -1.5
RUP1Q12242 YNL042W-BYNL042W-B 258 nt5.71□□□□□ -1.5
RUP1Q12242 PSH1YOL054W 1221 nt5.71□□□□□ -1.5
RUP1Q12242 ERI1YPL096C-A 207 nt5.71□□□□□ -1.5
RUP1Q12242 ABZ1YNR033W 2364 nt5.7□□□□□ -1.5
RUP1Q12242 GEX1YCL073C 1848 nt5.7□□□□□ -1.5
RUP1Q12242 GEX2YKR106W 1848 nt5.7□□□□□ -1.5
RUP1Q12242 YIL060WYIL060W 435 nt5.7□□□□□ -1.5
RUP1Q12242 GFD1YMR255W 567 nt5.7□□□□□ -1.5
RUP1Q12242 RBD2YPL246C 789 nt5.7□□□□□ -1.5
RUP1Q12242 ASF2YDL197C 1578 nt5.7□□□□□ -1.5
RUP1Q12242 UBA1YKL210W 3075 nt5.7□□□□□ -1.5
RUP1Q12242 ROG3YFR022W 2202 nt5.7□□□□□ -1.5
RUP1Q12242 RSC2YLR357W 2670 nt5.69□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms