Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 CBC2YPL178W 627 nt5.86□□□□□ -1.47
VPS13Q07878 FET3YMR058W 1911 nt5.86□□□□□ -1.47
VPS13Q07878 RPL21AYBR191W 483 nt5.85□□□□□ -1.47
VPS13Q07878 YHR045WYHR045W 1683 nt5.85□□□□□ -1.47
VPS13Q07878 COA1YIL157C 594 nt5.85□□□□□ -1.47
VPS13Q07878 YNR014WYNR014W 639 nt5.85□□□□□ -1.47
VPS13Q07878 DPH2YKL191W 1605 nt5.85□□□□□ -1.47
VPS13Q07878 VRP1YLR337C 2454 nt5.84□□□□□ -1.47
VPS13Q07878 SKY1YMR216C 2229 nt5.84□□□□□ -1.47
VPS13Q07878 MTM1YGR257C 1101 nt5.84□□□□□ -1.47
VPS13Q07878 ACS2YLR153C 2052 nt5.84□□□□□ -1.48
VPS13Q07878 MNN10YDR245W 1182 nt5.83□□□□□ -1.48
VPS13Q07878 GID7YCL039W 2238 nt5.83□□□□□ -1.48
VPS13Q07878 NHA1YLR138W 2958 nt5.83□□□□□ -1.48
VPS13Q07878 QCR8YJL166W 285 nt5.83□□□□□ -1.48
VPS13Q07878 YJL171CYJL171C 1191 nt5.83□□□□□ -1.48
VPS13Q07878 YFL034WYFL034W 3222 nt5.82□□□□□ -1.48
VPS13Q07878 ATO3YDR384C 828 nt5.82□□□□□ -1.48
VPS13Q07878 CBF1YJR060W 1056 nt5.82□□□□□ -1.48
VPS13Q07878 TIF5YPR041W 1218 nt5.82□□□□□ -1.48
VPS13Q07878 ECM27YJR106W 2178 nt5.82□□□□□ -1.48
VPS13Q07878 YLR154W-BYLR154W-B 165 nt5.81□□□□□ -1.48
VPS13Q07878 HDA1YNL021W 2121 nt5.81□□□□□ -1.48
VPS13Q07878 TEP1YNL128W 1305 nt5.81□□□□□ -1.48
VPS13Q07878 YDR134CYDR134C 411 nt5.81□□□□□ -1.48
VPS13Q07878 AIM2YAL049C 741 nt5.8□□□□□ -1.48
VPS13Q07878 VNX1YNL321W 2727 nt5.8□□□□□ -1.48
VPS13Q07878 SUA5YGL169W 1281 nt5.8□□□□□ -1.48
VPS13Q07878 LCP5YER127W 1074 nt5.79□□□□□ -1.48
VPS13Q07878 MCH2YKL221W 1422 nt5.79□□□□□ -1.48
VPS13Q07878 CMK2YOL016C 1344 nt5.79□□□□□ -1.48
VPS13Q07878 YLF2YHL014C 1218 nt5.79□□□□□ -1.48
VPS13Q07878 HIR1YBL008W 2523 nt5.79□□□□□ -1.48
VPS13Q07878 TAH11YJR046W 1815 nt5.79□□□□□ -1.48
VPS13Q07878 CTR2YHR175W 570 nt5.79□□□□□ -1.48
VPS13Q07878 PRP45YAL032C 1140 nt5.79□□□□□ -1.48
VPS13Q07878 GLN1YPR035W 1113 nt5.79□□□□□ -1.48
VPS13Q07878 GTB1YDR221W 2109 nt5.78□□□□□ -1.48
VPS13Q07878 PAC10YGR078C 600 nt5.78□□□□□ -1.48
VPS13Q07878 COX16YJL003W 357 nt5.78□□□□□ -1.48
VPS13Q07878 HXK1YFR053C 1458 nt5.78□□□□□ -1.48
VPS13Q07878 SOG2YOR353C 2376 nt5.78□□□□□ -1.48
VPS13Q07878 YBL010CYBL010C 843 nt5.78□□□□□ -1.48
VPS13Q07878 HOR7YMR251W-A 180 nt5.78□□□□□ -1.48
VPS13Q07878 PAT1YCR077C 2391 nt5.77□□□□□ -1.49
VPS13Q07878 OPI8YKR035C 642 nt5.77□□□□□ -1.49
VPS13Q07878 YNL057WYNL057W 333 nt5.77□□□□□ -1.49
VPS13Q07878 NHP6AYPR052C 282 nt5.77□□□□□ -1.49
VPS13Q07878 UBA3YPR066W 900 nt5.77□□□□□ -1.49
VPS13Q07878 SAF1YBR280C 1914 nt5.77□□□□□ -1.49
VPS13Q07878 LYS12YIL094C 1116 nt5.77□□□□□ -1.49
VPS13Q07878 CCS1YMR038C 750 nt5.77□□□□□ -1.49
VPS13Q07878 TOM5YPR133W-A 153 nt5.77□□□□□ -1.49
VPS13Q07878 FRS2YFL022C 1512 nt5.77□□□□□ -1.49
VPS13Q07878 RPT3YDR394W 1287 nt5.77□□□□□ -1.49
VPS13Q07878 VPS29YHR012W 849 nt5.77□□□□□ -1.49
VPS13Q07878 DTR1YBR180W 1719 nt5.76□□□□□ -1.49
VPS13Q07878 AMD1YML035C 2433 nt5.76□□□□□ -1.49
VPS13Q07878 SUP56tL(CAA)A 82 nt5.76□□□□□ -1.49
VPS13Q07878 SUP53tL(CAA)C 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)DtL(CAA)D 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)G1tL(CAA)G1 82 nt5.76□□□□□ -1.49
VPS13Q07878 SUP54tL(CAA)G2 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)G3tL(CAA)G3 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)KtL(CAA)K 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)LtL(CAA)L 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)MtL(CAA)M 82 nt5.76□□□□□ -1.49
VPS13Q07878 tL(CAA)NtL(CAA)N 82 nt5.76□□□□□ -1.49
VPS13Q07878 RPS15YOL040C 429 nt5.76□□□□□ -1.49
VPS13Q07878 TOS4YLR183C 1470 nt5.75□□□□□ -1.49
VPS13Q07878 CTS2YDR371W 1536 nt5.75□□□□□ -1.49
VPS13Q07878 DED81YHR019C 1665 nt5.75□□□□□ -1.49
VPS13Q07878 YUR1YJL139C 1287 nt5.74□□□□□ -1.49
VPS13Q07878 SAC6YDR129C 1929 nt5.74□□□□□ -1.49
VPS13Q07878 YDL032WYDL032W 312 nt5.74□□□□□ -1.49
VPS13Q07878 YAR023CYAR023C 540 nt5.74□□□□□ -1.49
VPS13Q07878 YPL264CYPL264C 1062 nt5.74□□□□□ -1.49
VPS13Q07878 EXO70YJL085W 1872 nt5.73□□□□□ -1.49
VPS13Q07878 ARG81YML099C 2643 nt5.73□□□□□ -1.49
VPS13Q07878 MSH1YHR120W 2880 nt5.73□□□□□ -1.49
VPS13Q07878 HSP31YDR533C 714 nt5.73□□□□□ -1.49
VPS13Q07878 CAB4YGR277C 918 nt5.73□□□□□ -1.49
VPS13Q07878 BGL2YGR282C 942 nt5.73□□□□□ -1.49
VPS13Q07878 RAD3YER171W 2337 nt5.73□□□□□ -1.49
VPS13Q07878 YLR173WYLR173W 1827 nt5.72□□□□□ -1.49
VPS13Q07878 RPN12YFR052W 825 nt5.72□□□□□ -1.49
VPS13Q07878 PFK2YMR205C 2880 nt5.71□□□□□ -1.49
VPS13Q07878 POM33YLL023C 840 nt5.71□□□□□ -1.5
VPS13Q07878 SCS2YER120W 735 nt5.71□□□□□ -1.5
VPS13Q07878 MRS1YIR021W 1092 nt5.71□□□□□ -1.5
VPS13Q07878 YIL060WYIL060W 435 nt5.7□□□□□ -1.5
VPS13Q07878 snR19snR19 568 nt5.7□□□□□ -1.5
VPS13Q07878 TIP41YPR040W 1071 nt5.7□□□□□ -1.5
VPS13Q07878 ITR1YDR497C 1755 nt5.69□□□□□ -1.5
VPS13Q07878 MKS1YNL076W 1755 nt5.69□□□□□ -1.5
VPS13Q07878 RPT1YKL145W 1404 nt5.69□□□□□ -1.5
VPS13Q07878 YAP1802YGR241C 1707 nt5.69□□□□□ -1.5
VPS13Q07878 YNG2YHR090C 849 nt5.69□□□□□ -1.5
VPS13Q07878 HST4YDR191W 1113 nt5.68□□□□□ -1.5
VPS13Q07878 AIM10YER087W 1731 nt5.68□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms