Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXCR4P61073 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXCR4P61073 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXCR4P61073 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXCR4P61073 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXCR4P61073 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXCR4P61073 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXCR4P61073 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.6■■□□□ 1.05
CXCR4P61073 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CXCR4P61073 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CXCR4P61073 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CXCR4P61073 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXCR4P61073 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CXCR4P61073 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CXCR4P61073 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.59■■□□□ 1.05
CXCR4P61073 CLDN5-201ENST00000403084 2357 ntBASIC21.59■■□□□ 1.05
CXCR4P61073 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CXCR4P61073 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CXCR4P61073 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.59■■□□□ 1.05
CXCR4P61073 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CXCR4P61073 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CXCR4P61073 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CXCR4P61073 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CXCR4P61073 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CXCR4P61073 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CXCR4P61073 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.58■■□□□ 1.05
CXCR4P61073 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.58■■□□□ 1.05
CXCR4P61073 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.58■■□□□ 1.05
CXCR4P61073 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CXCR4P61073 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.57■■□□□ 1.04
CXCR4P61073 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXCR4P61073 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CXCR4P61073 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.57■■□□□ 1.04
CXCR4P61073 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXCR4P61073 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXCR4P61073 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CXCR4P61073 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CXCR4P61073 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CXCR4P61073 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CXCR4P61073 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.55■■□□□ 1.04
CXCR4P61073 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.55■■□□□ 1.04
CXCR4P61073 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CXCR4P61073 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CXCR4P61073 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.54■■□□□ 1.04
CXCR4P61073 LINC01971-201ENST00000617888 1048 ntBASIC21.54■■□□□ 1.04
CXCR4P61073 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CXCR4P61073 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CXCR4P61073 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.54■■□□□ 1.04
CXCR4P61073 AC004812.2-201ENST00000611079 2094 ntBASIC21.54■■□□□ 1.04
CXCR4P61073 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CXCR4P61073 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CXCR4P61073 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CXCR4P61073 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CXCR4P61073 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CXCR4P61073 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CXCR4P61073 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CXCR4P61073 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CXCR4P61073 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CXCR4P61073 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.52■■□□□ 1.04
CXCR4P61073 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.52■■□□□ 1.04
CXCR4P61073 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.52■■□□□ 1.04
CXCR4P61073 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CXCR4P61073 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CXCR4P61073 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CXCR4P61073 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
CXCR4P61073 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CXCR4P61073 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CXCR4P61073 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CXCR4P61073 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CXCR4P61073 AC008813.1-201ENST00000536597 885 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L13-201ENST00000554103 1267 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L15-201ENST00000611059 1267 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L23-201ENST00000615195 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L24-201ENST00000617576 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L22-201ENST00000618238 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L20-201ENST00000619712 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L21-201ENST00000622058 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L10-201ENST00000622460 1267 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 DUX4L25-201ENST00000624915 1269 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CXCR4P61073 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
CXCR4P61073 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CXCR4P61073 MIR219A2-201ENST00000608502 1504 ntBASIC21.5■■□□□ 1.03
CXCR4P61073 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CXCR4P61073 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CXCR4P61073 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CXCR4P61073 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CXCR4P61073 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CXCR4P61073 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CXCR4P61073 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
CXCR4P61073 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
CXCR4P61073 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CXCR4P61073 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms