Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF144AP50876 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF144AP50876 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF144AP50876 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF144AP50876 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF144AP50876 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF144AP50876 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF144AP50876 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF144AP50876 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RNF144AP50876 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
RNF144AP50876 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RNF144AP50876 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 SPCS2P3-201ENST00000500401 656 ntBASIC21.94■■□□□ 1.1
RNF144AP50876 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.94■■□□□ 1.1
RNF144AP50876 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF144AP50876 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF144AP50876 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF144AP50876 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF144AP50876 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF144AP50876 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF144AP50876 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RNF144AP50876 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF144AP50876 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF144AP50876 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
RNF144AP50876 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
RNF144AP50876 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RNF144AP50876 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF144AP50876 AC138932.3-201ENST00000567634 1902 ntBASIC21.92■■□□□ 1.1
RNF144AP50876 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF144AP50876 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF144AP50876 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF144AP50876 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF144AP50876 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF144AP50876 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF144AP50876 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF144AP50876 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF144AP50876 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF144AP50876 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF144AP50876 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF144AP50876 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF144AP50876 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF144AP50876 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF144AP50876 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF144AP50876 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RNF144AP50876 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF144AP50876 SLC6A10P-202ENST00000431994 2058 ntBASIC21.89■■□□□ 1.09
RNF144AP50876 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RNF144AP50876 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF144AP50876 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF144AP50876 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
RNF144AP50876 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF144AP50876 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF144AP50876 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF144AP50876 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF144AP50876 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
RNF144AP50876 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
RNF144AP50876 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 KRT18P60-201ENST00000312876 1297 ntBASIC21.87■■□□□ 1.09
RNF144AP50876 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 ABHD17AP5-201ENST00000580133 923 ntBASIC21.87■■□□□ 1.09
RNF144AP50876 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF144AP50876 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF144AP50876 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
RNF144AP50876 DUX4L9-201ENST00000449051 1259 ntBASIC21.86■■□□□ 1.09
RNF144AP50876 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF144AP50876 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.86■■□□□ 1.09
RNF144AP50876 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF144AP50876 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF144AP50876 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF144AP50876 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF144AP50876 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF144AP50876 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RNF144AP50876 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF144AP50876 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF144AP50876 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF144AP50876 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF144AP50876 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF144AP50876 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF144AP50876 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF144AP50876 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF144AP50876 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RNF144AP50876 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF144AP50876 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms