Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 CAD1YDR423C 1230 nt8.04□□□□□ -1.12
SSM4P40318 ECM10YEL030W 1935 nt8.04□□□□□ -1.12
SSM4P40318 VTS1YOR359W 1572 nt8.04□□□□□ -1.12
SSM4P40318 YAP1801YHR161C 1914 nt8.04□□□□□ -1.12
SSM4P40318 YDL057WYDL057W 987 nt8.03□□□□□ -1.12
SSM4P40318 MID1YNL291C 1647 nt8.03□□□□□ -1.12
SSM4P40318 CEF1YMR213W 1773 nt8.03□□□□□ -1.12
SSM4P40318 YCR097W-AYCR097W-A 267 nt8.03□□□□□ -1.12
SSM4P40318 PGA3YML125C 939 nt8.03□□□□□ -1.12
SSM4P40318 VMA2YBR127C 1554 nt8.02□□□□□ -1.13
SSM4P40318 YFL042CYFL042C 2025 nt8.02□□□□□ -1.13
SSM4P40318 CLB1YGR108W 1416 nt8.02□□□□□ -1.13
SSM4P40318 YHR131CYHR131C 2553 nt8□□□□□ -1.13
SSM4P40318 HSF1YGL073W 2502 nt8□□□□□ -1.13
SSM4P40318 ARP2YDL029W 1176 nt8□□□□□ -1.13
SSM4P40318 COX26YDR119W-A 201 nt8□□□□□ -1.13
SSM4P40318 SYN8YAL014C 768 nt8□□□□□ -1.13
SSM4P40318 NUD1YOR373W 2556 nt7.99□□□□□ -1.13
SSM4P40318 YNR048WYNR048W 1182 nt7.99□□□□□ -1.13
SSM4P40318 RPS15YOL040C 429 nt7.99□□□□□ -1.13
SSM4P40318 RIO1YOR119C 1455 nt7.98□□□□□ -1.13
SSM4P40318 ATP1YBL099W 1638 nt7.97□□□□□ -1.13
SSM4P40318 YGR176WYGR176W 348 nt7.97□□□□□ -1.13
SSM4P40318 YLL059CYLL059C 507 nt7.97□□□□□ -1.13
SSM4P40318 YOL097W-AYOL097W-A 186 nt7.97□□□□□ -1.13
SSM4P40318 RGD1YBR260C 2001 nt7.97□□□□□ -1.13
SSM4P40318 STL1YDR536W 1710 nt7.96□□□□□ -1.14
SSM4P40318 KEX2YNL238W 2445 nt7.96□□□□□ -1.14
SSM4P40318 KNH1YDL049C 807 nt7.96□□□□□ -1.14
SSM4P40318 RPL7AYGL076C 735 nt7.96□□□□□ -1.14
SSM4P40318 SFC1YJR095W 969 nt7.96□□□□□ -1.14
SSM4P40318 NSG2YNL156C 900 nt7.96□□□□□ -1.14
SSM4P40318 ELA1YNL230C 1140 nt7.96□□□□□ -1.14
SSM4P40318 RPL7BYPL198W 735 nt7.96□□□□□ -1.14
SSM4P40318 NHP6BYBR089C-A 300 nt7.96□□□□□ -1.14
SSM4P40318 YRF1-4YLR466W 4149 nt7.95□□□□□ -1.14
SSM4P40318 TEA1YOR337W 2280 nt7.95□□□□□ -1.14
SSM4P40318 TRK2YKR050W 2670 nt7.95□□□□□ -1.14
SSM4P40318 COG1YGL223C 1254 nt7.95□□□□□ -1.14
SSM4P40318 OAC1YKL120W 975 nt7.95□□□□□ -1.14
SSM4P40318 DAL82YNL314W 768 nt7.95□□□□□ -1.14
SSM4P40318 ERG12YMR208W 1332 nt7.94□□□□□ -1.14
SSM4P40318 RPN7YPR108W 1290 nt7.94□□□□□ -1.14
SSM4P40318 UGO1YDR470C 1509 nt7.93□□□□□ -1.14
SSM4P40318 RTT106YNL206C 1368 nt7.93□□□□□ -1.14
SSM4P40318 RPT1YKL145W 1404 nt7.93□□□□□ -1.14
SSM4P40318 GIR2YDR152W 798 nt7.93□□□□□ -1.14
SSM4P40318 PIN2YOR104W 849 nt7.93□□□□□ -1.14
SSM4P40318 TEF1YPR080W 1377 nt7.92□□□□□ -1.14
SSM4P40318 TEF2YBR118W 1377 nt7.92□□□□□ -1.14
SSM4P40318 BRL1YHR036W 1416 nt7.92□□□□□ -1.14
SSM4P40318 CSC1YLR241W 2349 nt7.92□□□□□ -1.14
SSM4P40318 SNZ3YFL059W 897 nt7.92□□□□□ -1.14
SSM4P40318 IDP3YNL009W 1263 nt7.92□□□□□ -1.14
SSM4P40318 SNZ2YNL333W 897 nt7.92□□□□□ -1.14
SSM4P40318 YOL131WYOL131W 327 nt7.92□□□□□ -1.14
SSM4P40318 GPT2YKR067W 2232 nt7.91□□□□□ -1.14
SSM4P40318 YHR045WYHR045W 1683 nt7.91□□□□□ -1.14
SSM4P40318 RPT6YGL048C 1218 nt7.91□□□□□ -1.14
SSM4P40318 FAF1YIL019W 1041 nt7.91□□□□□ -1.14
SSM4P40318 YJR115WYJR115W 510 nt7.91□□□□□ -1.14
SSM4P40318 PRO3YER023W 861 nt7.9□□□□□ -1.14
SSM4P40318 CAR1YPL111W 1002 nt7.9□□□□□ -1.14
SSM4P40318 ENT2YLR206W 1842 nt7.9□□□□□ -1.14
SSM4P40318 SNU66YOR308C 1764 nt7.89□□□□□ -1.15
SSM4P40318 ATG22YCL038C 1587 nt7.89□□□□□ -1.15
SSM4P40318 YKR023WYKR023W 1593 nt7.88□□□□□ -1.15
SSM4P40318 BAP2YBR068C 1830 nt7.87□□□□□ -1.15
SSM4P40318 TDH3YGR192C 999 nt7.87□□□□□ -1.15
SSM4P40318 PPR1YLR014C 2715 nt7.87□□□□□ -1.15
SSM4P40318 ACF2YLR144C 2340 nt7.86□□□□□ -1.15
SSM4P40318 TFS1YLR178C 660 nt7.86□□□□□ -1.15
SSM4P40318 TIM54YJL054W 1437 nt7.85□□□□□ -1.15
SSM4P40318 PGU1YJR153W 1086 nt7.85□□□□□ -1.15
SSM4P40318 KTR3YBR205W 1215 nt7.85□□□□□ -1.15
SSM4P40318 UTP7YER082C 1665 nt7.84□□□□□ -1.15
SSM4P40318 DED81YHR019C 1665 nt7.84□□□□□ -1.15
SSM4P40318 IDP1YDL066W 1287 nt7.84□□□□□ -1.15
SSM4P40318 YHR127WYHR127W 732 nt7.84□□□□□ -1.15
SSM4P40318 SSK1YLR006C 2139 nt7.84□□□□□ -1.15
SSM4P40318 PIF1YML061C 2580 nt7.84□□□□□ -1.15
SSM4P40318 MLC1YGL106W 450 nt7.83□□□□□ -1.16
SSM4P40318 YGL194C-AYGL194C-A 243 nt7.83□□□□□ -1.16
SSM4P40318 YKL151CYKL151C 1014 nt7.83□□□□□ -1.16
SSM4P40318 YLR283WYLR283W 945 nt7.83□□□□□ -1.16
SSM4P40318 YLR317WYLR317W 435 nt7.83□□□□□ -1.16
SSM4P40318 YTH1YPR107C 627 nt7.83□□□□□ -1.16
SSM4P40318 CLB2YPR119W 1476 nt7.83□□□□□ -1.16
SSM4P40318 KDX1YKL161C 1302 nt7.82□□□□□ -1.16
SSM4P40318 MTQ1YNL063W 945 nt7.82□□□□□ -1.16
SSM4P40318 YPR195CYPR195C 330 nt7.82□□□□□ -1.16
SSM4P40318 MTC5YDR128W 3447 nt7.82□□□□□ -1.16
SSM4P40318 TAX4YJL083W 1815 nt7.82□□□□□ -1.16
SSM4P40318 MTQ2YDR140W 666 nt7.81□□□□□ -1.16
SSM4P40318 SUA5YGL169W 1281 nt7.81□□□□□ -1.16
SSM4P40318 YOR318CYOR318C 306 nt7.81□□□□□ -1.16
SSM4P40318 GCD11YER025W 1584 nt7.81□□□□□ -1.16
SSM4P40318 ESC8YOL017W 2145 nt7.81□□□□□ -1.16
SSM4P40318 SLO1YER180C-A 258 nt7.8□□□□□ -1.16
SSM4P40318 SEC13YLR208W 894 nt7.8□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms