Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.8■□□□□ 0.92
ALX3O95076 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALX3O95076 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.79■□□□□ 0.92
ALX3O95076 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.79■□□□□ 0.92
ALX3O95076 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX3O95076 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALX3O95076 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.78■□□□□ 0.92
ALX3O95076 AC142381.3-201ENST00000568208 1670 ntBASIC20.78■□□□□ 0.92
ALX3O95076 AC126177.7-201ENST00000547904 679 ntBASIC20.78■□□□□ 0.92
ALX3O95076 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.78■□□□□ 0.92
ALX3O95076 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ALX3O95076 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.78■□□□□ 0.92
ALX3O95076 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALX3O95076 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX3O95076 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ALX3O95076 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ALX3O95076 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX3O95076 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX3O95076 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX3O95076 AC096887.2-201ENST00000623443 1957 ntBASIC20.77■□□□□ 0.92
ALX3O95076 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALX3O95076 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ALX3O95076 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALX3O95076 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.76■□□□□ 0.91
ALX3O95076 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ALX3O95076 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.76■□□□□ 0.91
ALX3O95076 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.76■□□□□ 0.91
ALX3O95076 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.76■□□□□ 0.91
ALX3O95076 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ALX3O95076 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX3O95076 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.75■□□□□ 0.91
ALX3O95076 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.75■□□□□ 0.91
ALX3O95076 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ALX3O95076 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.75■□□□□ 0.91
ALX3O95076 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ALX3O95076 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALX3O95076 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
ALX3O95076 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX3O95076 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX3O95076 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ALX3O95076 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX3O95076 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.74■□□□□ 0.91
ALX3O95076 CR559946.2-201ENST00000623684 991 ntBASIC20.74■□□□□ 0.91
ALX3O95076 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX3O95076 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
ALX3O95076 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ALX3O95076 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.73■□□□□ 0.91
ALX3O95076 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX3O95076 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ALX3O95076 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.72■□□□□ 0.91
ALX3O95076 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ALX3O95076 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
ALX3O95076 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX3O95076 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.72■□□□□ 0.91
ALX3O95076 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ALX3O95076 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALX3O95076 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ALX3O95076 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX3O95076 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ALX3O95076 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX3O95076 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ALX3O95076 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX3O95076 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX3O95076 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms