Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SSSCA1O60232 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.26■□□□□ 0.67
SSSCA1O60232 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSSCA1O60232 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.26■□□□□ 0.67
SSSCA1O60232 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.25■□□□□ 0.67
SSSCA1O60232 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 SLC6A10P-202ENST00000431994 2058 ntBASIC19.25■□□□□ 0.67
SSSCA1O60232 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SSSCA1O60232 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSSCA1O60232 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.25■□□□□ 0.67
SSSCA1O60232 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSSCA1O60232 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSSCA1O60232 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSSCA1O60232 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.23■□□□□ 0.67
SSSCA1O60232 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SSSCA1O60232 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SSSCA1O60232 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SSSCA1O60232 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSSCA1O60232 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSSCA1O60232 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSSCA1O60232 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.23■□□□□ 0.67
SSSCA1O60232 AC087741.3-201ENST00000624270 1347 ntBASIC19.23■□□□□ 0.67
SSSCA1O60232 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSSCA1O60232 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSSCA1O60232 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.22■□□□□ 0.67
SSSCA1O60232 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSSCA1O60232 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.22■□□□□ 0.67
SSSCA1O60232 AC141586.4-201ENST00000624558 1573 ntBASIC19.22■□□□□ 0.67
SSSCA1O60232 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSSCA1O60232 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSSCA1O60232 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
SSSCA1O60232 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
SSSCA1O60232 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSSCA1O60232 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SSSCA1O60232 AP006261.1-201ENST00000584783 668 ntBASIC19.21■□□□□ 0.67
SSSCA1O60232 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSSCA1O60232 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SSSCA1O60232 DUSP8P5-201ENST00000422884 1815 ntBASIC19.21■□□□□ 0.67
SSSCA1O60232 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSSCA1O60232 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.2■□□□□ 0.66
SSSCA1O60232 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSSCA1O60232 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSSCA1O60232 AL359504.2-201ENST00000605506 1601 ntBASIC19.2■□□□□ 0.66
SSSCA1O60232 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSSCA1O60232 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSSCA1O60232 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSSCA1O60232 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSSCA1O60232 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.19■□□□□ 0.66
SSSCA1O60232 AC021231.2-201ENST00000594613 730 ntBASIC19.19■□□□□ 0.66
SSSCA1O60232 AC044849.2-201ENST00000606596 710 ntBASIC19.19■□□□□ 0.66
SSSCA1O60232 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSSCA1O60232 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SSSCA1O60232 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SSSCA1O60232 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
SSSCA1O60232 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSSCA1O60232 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSSCA1O60232 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSSCA1O60232 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSSCA1O60232 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSSCA1O60232 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.18■□□□□ 0.66
SSSCA1O60232 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSSCA1O60232 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSSCA1O60232 AC079834.2-201ENST00000609776 1949 ntBASIC19.17■□□□□ 0.66
SSSCA1O60232 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSSCA1O60232 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSSCA1O60232 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSSCA1O60232 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSSCA1O60232 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSSCA1O60232 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.17■□□□□ 0.66
SSSCA1O60232 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.17■□□□□ 0.66
SSSCA1O60232 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSSCA1O60232 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSSCA1O60232 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSSCA1O60232 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.16■□□□□ 0.66
SSSCA1O60232 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSSCA1O60232 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSSCA1O60232 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSSCA1O60232 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
SSSCA1O60232 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 AL359258.2-201ENST00000564063 1566 ntBASIC19.15■□□□□ 0.66
SSSCA1O60232 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSSCA1O60232 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.15■□□□□ 0.66
SSSCA1O60232 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 MIR219A2-201ENST00000608502 1504 ntBASIC19.15■□□□□ 0.66
SSSCA1O60232 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSSCA1O60232 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
SSSCA1O60232 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms