Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA4O00483 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFA4O00483 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFA4O00483 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA4O00483 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFA4O00483 DUX4L9-201ENST00000449051 1259 ntBASIC18.2■□□□□ 0.5
NDUFA4O00483 SPCS2P3-201ENST00000500401 656 ntBASIC18.2■□□□□ 0.5
NDUFA4O00483 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFA4O00483 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFA4O00483 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NDUFA4O00483 AC022211.4-201ENST00000625094 2161 ntBASIC18.2■□□□□ 0.5
NDUFA4O00483 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NDUFA4O00483 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 KRT18P60-201ENST00000312876 1297 ntBASIC18.19■□□□□ 0.5
NDUFA4O00483 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 RPS2P7-201ENST00000447334 885 ntBASIC18.19■□□□□ 0.5
NDUFA4O00483 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFA4O00483 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NDUFA4O00483 AC129492.7-201ENST00000622992 756 ntBASIC18.19■□□□□ 0.5
NDUFA4O00483 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA4O00483 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFA4O00483 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDUFA4O00483 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 SLC6A10P-202ENST00000431994 2058 ntBASIC18.18■□□□□ 0.5
NDUFA4O00483 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDUFA4O00483 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDUFA4O00483 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA4O00483 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NDUFA4O00483 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NDUFA4O00483 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.17■□□□□ 0.5
NDUFA4O00483 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.17■□□□□ 0.5
NDUFA4O00483 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA4O00483 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NDUFA4O00483 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.16■□□□□ 0.5
NDUFA4O00483 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA4O00483 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA4O00483 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFA4O00483 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA4O00483 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA4O00483 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA4O00483 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
NDUFA4O00483 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.15■□□□□ 0.5
NDUFA4O00483 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA4O00483 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA4O00483 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NDUFA4O00483 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.15■□□□□ 0.5
NDUFA4O00483 AC087393.1-201ENST00000582896 145 ntBASIC18.15■□□□□ 0.5
NDUFA4O00483 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA4O00483 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA4O00483 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFA4O00483 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFA4O00483 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NDUFA4O00483 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFA4O00483 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA4O00483 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NDUFA4O00483 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
NDUFA4O00483 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.13■□□□□ 0.49
NDUFA4O00483 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDUFA4O00483 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 FOXO3B-201ENST00000395675 1928 ntBASIC18.13■□□□□ 0.49
NDUFA4O00483 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA4O00483 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFA4O00483 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA4O00483 AP003733.4-201ENST00000623785 1697 ntBASIC18.12■□□□□ 0.49
NDUFA4O00483 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFA4O00483 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFA4O00483 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NDUFA4O00483 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms