Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV6-1A0A0K0K1D8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-1A0A0K0K1D8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV6-1A0A0K0K1D8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L13-201ENST00000554103 1267 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L15-201ENST00000611059 1267 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L23-201ENST00000615195 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L24-201ENST00000617576 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 LINC01971-201ENST00000617888 1048 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L22-201ENST00000618238 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L20-201ENST00000619712 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L21-201ENST00000622058 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L10-201ENST00000622460 1267 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DUX4L25-201ENST00000624915 1269 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 AC004812.2-201ENST00000611079 2094 ntBASIC17.75■□□□□ 0.43
TRBV6-1A0A0K0K1D8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 AL162393.1-201ENST00000437852 946 ntBASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-1A0A0K0K1D8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-1A0A0K0K1D8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-1A0A0K0K1D8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-1A0A0K0K1D8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms