Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 AL592293.1-201ENST00000502889 1188 ntBASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 SPCS2P3-201ENST00000500401 656 ntBASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.02■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 U85056.1-201ENST00000616429 682 ntBASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.97■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
IGKV1D-43A0A0B4J1Z2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 AL139125.2-201ENST00000623134 1869 ntBASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 AC093323.1-202ENST00000635031 2045 ntBASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 DUX4L9-201ENST00000449051 1259 ntBASIC20.92■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGKV1D-43A0A0B4J1Z2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms