Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TSPY22P-201ENST00000427496 604 ntBASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 VENTXP7-201ENST00000475503 772 ntBASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 AC073592.5-201ENST00000624854 528 ntBASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 SIGLEC30P-201ENST00000455569 941 ntBASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 AC069224.1-201ENST00000566372 1715 ntBASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB1Q9Y5G3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB1Q9Y5G3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms