Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.08■□□□□ 0.32
YIPF1Q9Y548 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 AL358472.5-202ENST00000641448 1267 ntBASIC17.08■□□□□ 0.32
YIPF1Q9Y548 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YIPF1Q9Y548 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 RN7SL692P-201ENST00000464677 288 ntBASIC17.07■□□□□ 0.32
YIPF1Q9Y548 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 AL033527.5-202ENST00000641632 1098 ntBASIC17.07■□□□□ 0.32
YIPF1Q9Y548 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
YIPF1Q9Y548 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 AC007541.1-201ENST00000570282 1469 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 UBALD1-205ENST00000590891 2641 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 U82695.1-201ENST00000635752 1889 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 GNAQP1-201ENST00000444815 1067 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 SPDYE18-201ENST00000510091 1050 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 AL596325.1-201ENST00000563991 1082 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 AC004790.1-201ENST00000612686 536 ntBASIC17.06■□□□□ 0.32
YIPF1Q9Y548 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YIPF1Q9Y548 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YIPF1Q9Y548 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms