Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMBRD1Q9NUN5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 DUX4L26-201ENST00000489078 1255 ntBASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 AP001269.4-201ENST00000609611 512 ntBASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 AC023908.3-201ENST00000564211 3047 ntBASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMBRD1Q9NUN5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LMBRD1Q9NUN5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.89■□□□□ 0.62
LMBRD1Q9NUN5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LMBRD1Q9NUN5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LMBRD1Q9NUN5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.89■□□□□ 0.62
LMBRD1Q9NUN5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AC074051.2-201ENST00000565115 352 ntBASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AP002414.4-201ENST00000589764 1148 ntBASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AC106881.1-201ENST00000605849 3329 ntBASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 AL353732.1-201ENST00000569618 1459 ntBASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMBRD1Q9NUN5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 SNX18-202ENST00000343017 3140 ntBASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 AL031133.1-201ENST00000406807 723 ntBASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 AC092329.2-201ENST00000598402 547 ntBASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 AL022326.1-202ENST00000641533 845 ntBASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 AF228730.7-201ENST00000641842 219 ntBASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LMBRD1Q9NUN5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms