Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 RN7SL606P-201ENST00000472779 293 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 RPL13AP23-201ENST00000480739 586 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 AC073648.2-201ENST00000510116 352 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 AP005901.3-202ENST00000581653 237 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 AC243591.1-201ENST00000452967 1364 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 LINC02447-202ENST00000501888 2146 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 AC091607.1-201ENST00000490318 1060 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 AL591684.3-201ENST00000605187 298 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 AL691403.2-201ENST00000618460 490 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 PPT1-215ENST00000641471 2368 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 ZNF259P1-201ENST00000407656 1365 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 SNX33P1-201ENST00000592116 1762 ntBASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCM2LQ9NUG4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 AC011840.4-201ENST00000578471 627 ntBASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 AC073592.5-201ENST00000624854 528 ntBASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms