Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 AGAP7P-201ENST00000582299 2062 ntBASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 AGAP14-201ENST00000624701 2060 ntBASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42SE1Q9NRR8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 KATNBL1P6-202ENST00000562413 1466 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CDC14C-201ENST00000428251 1719 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AC145098.2-201ENST00000623593 3026 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AC004945.1-201ENST00000416738 983 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 OR2I1P-207ENST00000453522 948 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AC022616.5-201ENST00000518796 181 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AP002490.2-201ENST00000524791 560 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 AL356652.1-201ENST00000615962 565 ntBASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42SE1Q9NRR8 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms