Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RPSAP43-201ENST00000402237 625 ntBASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.15■□□□□ 0.02
SDHAF3Q9NRP4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 TFAMP1-201ENST00000412727 736 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AL355306.1-201ENST00000415580 579 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SPDYE11-202ENST00000450699 704 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SPDYE9P-201ENST00000570642 692 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AC026120.1-201ENST00000611536 926 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SPDYE10P-202ENST00000612005 668 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 SPDYE8P-202ENST00000612377 668 ntBASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SDHAF3Q9NRP4 AC084018.2-201ENST00000613093 2607 ntBASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms