Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 TTTY23B-201ENST00000442790 549 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AC093724.1-201ENST00000448659 1027 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AC119751.2-201ENST00000504529 210 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 SPDYE18-201ENST00000510091 1050 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 MIR4525-201ENST00000580000 75 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AL512343.1-201ENST00000605837 169 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 AC011676.5-201ENST00000624864 2660 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 PCDHA12-202ENST00000613593 2588 ntBASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 AC092171.3-201ENST00000610122 2651 ntBASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 RN7SL618P-201ENST00000477850 296 ntBASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SPTSSB-204ENST00000617024 1292 ntBASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SLC7A15P-201ENST00000424028 1363 ntBASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM7Q9NR12 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 AL512361.1-201ENST00000554200 418 ntBASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM7Q9NR12 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms