Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
HPS4Q9NQG7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 AC073439.1-201ENST00000624121 1774 ntBASIC17.02■□□□□ 0.32
HPS4Q9NQG7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 AC063926.2-201ENST00000623766 1308 ntBASIC17.02■□□□□ 0.32
HPS4Q9NQG7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.02■□□□□ 0.32
HPS4Q9NQG7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 HLA-H-201ENST00000383620 1096 ntBASIC17.02■□□□□ 0.32
HPS4Q9NQG7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 AP005018.1-201ENST00000525475 301 ntBASIC17.02■□□□□ 0.32
HPS4Q9NQG7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.02■□□□□ 0.32
HPS4Q9NQG7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HPS4Q9NQG7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AC244107.1-201ENST00000442033 332 ntBASIC17.01■□□□□ 0.31
HPS4Q9NQG7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AC013467.2-201ENST00000605472 835 ntBASIC17.01■□□□□ 0.31
HPS4Q9NQG7 SNX33P1-201ENST00000592116 1762 ntBASIC17.01■□□□□ 0.31
HPS4Q9NQG7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 AC022144.1-201ENST00000602255 1580 ntBASIC17.01■□□□□ 0.31
HPS4Q9NQG7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPS4Q9NQG7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 NKILA-202ENST00000614771 2598 ntBASIC17■□□□□ 0.31
HPS4Q9NQG7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17■□□□□ 0.31
HPS4Q9NQG7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms