Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 AC007064.4-201ENST00000637740 555 ntBASIC17.38■□□□□ 0.37
CD248Q9HCU0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD248Q9HCU0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CD248Q9HCU0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC005915.1-201ENST00000624912 2018 ntBASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC099063.4-201ENST00000641099 1602 ntBASIC17.37■□□□□ 0.37
CD248Q9HCU0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.37■□□□□ 0.37
CD248Q9HCU0 AP002472.1-201ENST00000577490 586 ntBASIC17.37■□□□□ 0.37
CD248Q9HCU0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 AL513210.1-201ENST00000629608 234 ntBASIC17.37■□□□□ 0.37
CD248Q9HCU0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.37■□□□□ 0.37
CD248Q9HCU0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD248Q9HCU0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.36■□□□□ 0.37
CD248Q9HCU0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 AC092171.3-201ENST00000610122 2651 ntBASIC17.36■□□□□ 0.37
CD248Q9HCU0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD248Q9HCU0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms