Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 AC025580.3-201ENST00000617932 1424 ntBASIC15.75■□□□□ 0.11
BRF2Q9HAW0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.75■□□□□ 0.11
BRF2Q9HAW0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 KRT19P2-202ENST00000557173 1012 ntBASIC15.74■□□□□ 0.11
BRF2Q9HAW0 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 LINC02199-201ENST00000506655 2702 ntBASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRF2Q9HAW0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 IL9RP2-201ENST00000423948 1312 ntBASIC15.73■□□□□ 0.11
BRF2Q9HAW0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.73■□□□□ 0.11
BRF2Q9HAW0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms