Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.81■□□□□ 0.12
PIF1Q9H611 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PIF1Q9H611 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PIF1Q9H611 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
PIF1Q9H611 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.8■□□□□ 0.12
PIF1Q9H611 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.8■□□□□ 0.12
PIF1Q9H611 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 ABCD1P5-201ENST00000445663 754 ntBASIC15.8■□□□□ 0.12
PIF1Q9H611 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.8■□□□□ 0.12
PIF1Q9H611 BX005266.1-201ENST00000473402 457 ntBASIC15.8■□□□□ 0.12
PIF1Q9H611 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PIF1Q9H611 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.8■□□□□ 0.12
PIF1Q9H611 AP000867.3-201ENST00000524675 377 ntBASIC15.8■□□□□ 0.12
PIF1Q9H611 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 AC064862.7-201ENST00000604520 867 ntBASIC15.8■□□□□ 0.12
PIF1Q9H611 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.8■□□□□ 0.12
PIF1Q9H611 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 AL031731.1-201ENST00000642131 2094 ntBASIC15.8■□□□□ 0.12
PIF1Q9H611 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.8■□□□□ 0.12
PIF1Q9H611 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PIF1Q9H611 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC079776.2-201ENST00000641154 1609 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PIF1Q9H611 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.79■□□□□ 0.12
PIF1Q9H611 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 SIGLEC16-201ENST00000599858 1437 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC092119.3-201ENST00000612618 583 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC093458.2-201ENST00000623150 629 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 AL139011.1-202ENST00000642063 584 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
PIF1Q9H611 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PIF1Q9H611 AC073347.1-201ENST00000421633 2643 ntBASIC15.79■□□□□ 0.12
PIF1Q9H611 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.79■□□□□ 0.12
PIF1Q9H611 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.78■□□□□ 0.12
PIF1Q9H611 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.78■□□□□ 0.12
PIF1Q9H611 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 395 ms