Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 AC092338.2-201ENST00000568827 1415 ntBASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C1QBPP2-201ENST00000528754 825 ntBASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC142086.2-201ENST00000569753 217 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms