Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 AC145285.6-201ENST00000604632 637 ntBASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSBP4Q9BWG4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FAM45BP-202ENST00000592932 1624 ntBASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 FAM220CP-201ENST00000395253 831 ntBASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 HLA-J-202ENST00000469281 1241 ntBASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 AL138831.2-201ENST00000606564 490 ntBASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 AC011558.1-201ENST00000623459 338 ntBASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP4Q9BWG4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms